Microsoft word - thesis 1.3.doc
The Extraction of Native Giardia lamblia Actin
Through Differential Detergent Treatment
Nicholas Barker Stoler
Submitted in fulfillment of the Senior Thesis requirement
in the Department of Biology, Georgetown University,
Washington, D.C., May 2008
NICHOLAS B. STOLER
The Extraction of Native Giardia lamblia Actin Through Differential Detergent
Treatment
Dr. Heidi G. Elmendorf, Department of Biology, Georgetown University
Giardia lamblia is an intestinal pathogen which is universally encountered in the
third world. Giardia is a protozoan parasite which must attach to the intestinal wall in order to remain in the digestive tract and thrive. It attaches with its ventral surface to the intestinal endothelium. Previous research by our lab has suggested that actin-based microfilaments direct this process. Inhibiting the function of actin would thus be very effective at reducing disease pathology.
Studies to better understand Giardia actin are most effective with a high-fidelity
version of the protein. The Giardial version of actin is rare in that it is only 60% identical to human actin, while actin is well-conserved amongst most other eukaryotes. The simplest expression system to produce this actin exogenously would use E. coli, but that may result in a non-native conformation due to the lack of eukaryotic folding factors. Also, a standard eukaryotic expression system using Baculovirus has been attempted by our lab but resulted in poor yields. Thus in order to produce the most accurate version of the protein, I have refined procedures towards extracting actin from Giardia cells themselves. The focus of this study was a strategy for detergent-extracting Giardia cells so that cellular contents are removed before dissociating an actin-enriched eluate. I have developed a preliminary detergent buffer and methods of visualizing the extraction process. Following extraction, I will then further purify the actin in the eluate. The actin produced by this method will be useful for drug-binding studies, actin polymerization kinetics studies, electron microscopic investigation of microfilament morphology, and the search for actin-associated proteins in Giardia.
I would like to thank everyone who has supported me and helped me through my
entire tenure at the Elmendorf lab. First, Dr. Heidi Elmendorf, who has created an
atmosphere that is both relaxed and conscientiously inquisitive. Her scientific nurturing
through the years has equipped me with the most useful tools I could ask for in the real
world of science. I also deeply appreciate the advocacy and generosity of Dr. Joseph
Neale and the rest of the Howard Hughes Program at Georgetown. I would have far
fewer years of experience behind me if it weren't for them. Next, I would like to thank
the many members of the Elmendorf lab, especially Jesse Cohen and Colleen Walls, who
over the years have helped me learn everything I know about working in a lab. Finally I
want to express my gratitude to my friends and especially my family for enduring all my
concerns about my tasks and supporting me through it all.
Table of Contents
Chapter I. Introduction
A.
Giardia and giardiasis
B. The
Giardia Cytoskeleton
C. Mechanism of Attachment
D. Targeting Actin
E. Isolation of
Giardia Actin
Chapter II. Materials and Methods
A. Culturing
Giardia lamblia
B. Preparation of
Giardia for fluorescent staining and microscopic
C. Fluorescent labeling of
Giardia microfilaments with
Cytochalasin D-BODIPY FL
D. Fluorescent labeling of
Giardia membranes with CM-DiI
E. Fluorescent labeling of
Giardia membranes with
BODIPY FL C5-ceramide
F. Light microscope observation of detergent treatment of
Giardia lamblia
Chapter III. Results
A. Microscopic observations of detergent treatment of
Giardia
B. Fluorescent labeling of
Giardia microfilaments with
Cytochalasin D-BODIPY FL
C. Fluorescent labeling of
Giardia outer membranes with CM-DiI
D. Fluorescent labeling of
Giardia membranes with
BODIPY FL C5-ceramide
Chapter IV. Discussion
Giardia and giardiasis
Giardia lamblia is a worldwide health problem that requires better solutions.
Giardia lamblia is the causative agent of giardiasis, a disease which affected over 200
million people per year in 2002 (Lane and Lloyd, 2002). giardiasis is a major diarrheal
disease worldwide, and diarrheal diseases account for a quarter of deaths under the age of
5 (Bryce
et al., 2005). Side effects of and growing resistance to current treatments is a
problem, giving importance to the search for new drugs.
The
Giardia lamblia pathogen itself is a potentially early diverging unicellular
protozoan. It is of the family Hexamitidae in the order Diplomonadida, indicating its
twin nuclei. It is thought to be of a lineage which diverged soon after the evolution of
eukaryotes. One reason for this hypothesis is the species' lack of typical eukaryotic
features such as golgi apparati and mitochondria. However, recently evidence has been
found for mitochondrial and golgi-related genes. This indicates the presence of these
organelles at some point in its evolutionary history, meaning
Giardia did not diverge
before their existence (Dacks
et al., 2003; Emelyanov, 2003). But evidence remains in
rRNA sequence phylogenetics that
G. lamblia is a basal eukaryote (Sogin
et al., 1989).
A consequence of this distinction is that many giardial systems are very divergent
compared to their human and eukaryotic counterparts.
When symptomatic,
Giardia infection causes malabsorptive diarrhea that poses a
major problem for most of the world. Most infections are asymptomatic, but when they
present symptoms they usually produce persistent diarrhea lasting over two weeks
(Ortega and Adam, 1997). This can be life-threatening in the third-world, especially in
children. Between 2000 and 2003, diarrheal diseases caused 18% of all deaths in
children younger than 5, lower than only pneumonia (Bryce
et al., 2005). In a study at a
hospital in Mozambique in 2001, 2.5% of children under 5 admitted for diarrhea were
infected with
Giardia (Mandomando
et al., 2007). Even when the infection is cleared,
the effect on childhood development remains. Affected children have more trouble
growing and gaining weight compared to those spared of infection (Fraser
et al., 2000).
The effect on livestock is also significant, with a Canadian study showing 100%
prevalence of
Giardia in beef calves (Ralston
et al., 2003). Infection inhibits livestock
weight gain while simultaneously increasing required feed usage (Olson
et al., 2004).
Usually-effective drug treatments exist for giardiasis, but there are problems with
the current repertoire including side effects and recurrence. The current standard is
metronidazole, with alternatives being tinidazole, furazolidone, and quinacrine.
Difficulties include the fact that furazolidone can cause complications in patients of a
certain genotype and quinacrine causes significant side effects. A major issue with
current drugs is the issue of recurrence. After metronidazole treatment, the persistence of
chronic giardiasis can be as high as 32% in the following 7 months (Hanevik
et al.,
Resistance is also an increasing problem for many of these drugs. Resistance to
metronidazole is up to 20% as of 2007. Often, these drugs will inhibit the same cellular
process in
Giardia. Thus, resistance to one will also act as resistance to another, such as
the case of metronidazole and tinidazole (Ali and Nozaki, 2007). To truly address the
problem of resistance, new molecular targets for drugs have to be found.
The pathology of giardiasis is caused by intestinal colonization by the trophozoite
form of the parasite.
Giardia alternates between the trophozoite and a cyst stage. The
trophozoite form is more metabolically active while the cyst is seen as mostly dormant.
Trophozoites will colonize the duodenum and jejunum and absorb nutrients in order to
grow and multiply (Astiazaran-Garcia
et al., 2000). The covering of the intestinal
absorptive surface by
Giardia may cause the malabsorption, as may the morphological
changes they induce in intestinal villi (Adam, 1991). Some trophozoites are then forced
further down the small intestine and differentiate into the cyst form (Luján
et al., 1996).
These cysts are eliminated with the rest of the gastrointestinal waste and can survive
harsh environmental conditions (Gillin
et al., 1996). When cysts are ingested, they
respond to low gastric pH and then higher intestinal pH by excysting back into the
trophozoite form (Boucher and Gillin, 1990).
The Giardia Cytoskeleton
An understanding of the eukaryotic cytoskeleton is essential to understanding the
source of a cell's shape and structural strength, as well its motility. The
Giardia
cytoskeleton is important in supplying each of these characteristics, with the addition of a
fourth: pathogenicity.
Protozoan cytoskeletons are typically composed of two different types of
filaments: microtubules and microfilaments. Only microtubules and microfilaments have
been described in Giardia (Elmendorf
et al., 2003). Microtubules are composed of the
proteins α- and β-tubulin polymerized into strong tubes 25 nm in diameter. Microtubules
are the structural components of flagella and their basal bodies. Microfilaments are
narrower (5-9 nm) fibres composed of polymerized actin monomers. The monomers
stack one on top of the other two proteins wide and progress in a helix. In most
eukaryotic cells, numerous different proteins bind to tubulin and actin their polymerized
and monomeric forms. While a number of microtubule-associated proteins are known in
Giardia (Shapiro, 2006), currently no actin-binding proteins have been discovered
(Elmendorf
et al., 2003).
The
Giardia cytoskeleton contains several ultrastructural features discernable by
light microscopy. To locate these features, the basic anatomy of the trophozoite must be
understood. They are bilaterally symmetrical teardrop-shaped cells with distinct dorsal,
ventral, anterior, and posterior ends. Features include a ventral disk crucial to
attachment, a microtubule-based median body central in the cell, a funis of microtubules
stretching between the caudal and posterior axonemes, and four pairs of flagella
(Elmendorf
et al., 2003). Each of these structures is composed of microtubules a main
structural element, along with many other associated proteins. Of interest to this study,
there is often evidence of actin being one of the associated proteins of a particular
These cytoskeletal elements are largely interconnected. The microtubules which
form the ventral disk can be seen to emerge from the flagellar basal bodies in a spiral.
Also, the axonemes of the posterior flagella are linked along their length to the caudal
axonemes by fibers of the funis (Benchimol
et al., 2004). Even the median body seems
to be anchored somewhat to the dorsal plasma membrane (Piva and Benchimol, 2004).
The nuclei too are linked to the cytoskeleton through the axonemes (Benchimol, 2005).
The median body is a largely uncharacterized microtubule-based structure which
lies posterior to the nuclei. It appears as a bundle of rods slightly curved in shape which
almost spans the width of the cell. It consists of microtubules bundled in no clear pattern.
This grouping of microtubules leads some to suggest it functions as a store of
prefabricated microtubules (Piva and Benchimol, 2004). Other proteins which are
associated are actin, α-actinin, β-giardin and a coiled-coil protein specific to the median
body (Feely
et al., 1982; Marshall and Holberton, 1993).
Unlike most structures in
Giardia, the flagella appear to be similar those of most
other protozoa. They exhibit the standard 9+2 microtubule arrangement, and originate in
basal bodies near the midpoint of the nuclei (Friend, 1966). There are eight total flagella,
arranged in four pairs which extend from various points on the cell surface. The anterior
pair run from their basal bodies toward the anterior end of the cell, then curve back
around to emerge from the anterior end in the caudal direction. The ventral flagella
surface on the ventral side of the parasite under the ventral disk. They lie in a groove in
the ventral surface, running posteriorly. The caudal flagella run straight from the basal
bodies down the centerline of the cell, then out the caudal tip of the tail. The posterior-
lateral flagella run from the basal bodies out toward the posterior sides of the cell body.
They form an acute angle with the caudal flagella so that the distance between the two
pairs of flagella increases as they run toward the back of the cell. Eventually the
posterior-lateral flagella emerge from the posterior sides of the cell (Elmendorf
et al.,
2003; Benchimol
et al., 2004).
Many intracellular portions of the axonemes of the flagella are accompanied by
other structures as they run through the cytoplasm.
Giardia's flagella are unusual in that
their axonemes often have long intracellular portions. Thus the structures associated with
these extended intracellular axonemes are not found in other organisms. A series of
electron-dense material called the "striated fibres" runs alongside the anterior flagella and
also contacts the ventrolateral flange (Holberton, 1973). "Dense rods," another type of
electron-dense material, have also been described running alongside the anterior and
posterior-lateral axonemes. These dense rods have shown localization of centrin (Correa
et al., 2004). Also, actin has been found along the basal bodies and near the dense rods
of the posterior-lateral axonemes (Feely
et al., 1982; Narcisi
et al., 1994). Then along the
caudal flagella runs the most complex electron-dense material, the funis.
The funis is a complex structure located in the caudal complex or "tail" of the
cell. It begins as two sheets of microtubules which run along the caudal axonemes. The
sheets of microtubules are on the ventral side of one caudal axoneme and on the dorsal
side of the other. Each sheet then tapers off as its constituent microtubules veer off
laterally one at a time towards one of the posterior-lateral axonemes. The funis
microtubules attach to the posterior-lateral axonemes, forming a net covering the area
between those axonemes and the caudal ones (Benchimol
et al., 2004). Benchimol
et al.
further propose that the funis microtubules attach specifically to the dense rods running
along the posterior-lateral axonemes, though this remains unclear. Parallel funis
microtubules in this net are themselves linked to each other by filamentous bridges.
After the posterior-lateral axonemes exit the cell body, the microtubules are anchored to a
filamentous network associated with the plasma membrane. The microtubules have been
observed covered by an unidentified electron-dense material (Benchimol
et al., 2004).
The ventral disk structure dominates the entire
Giardia ultrastructure. The disk is
a domed structure with a space in the center which sits just under the ventral plasma
membrane. The structure is based on a spiral whorl of microtubules extending from the
gap in the center. The part which overlays the caudal axonemes is reduced in radius,
resulting in a notch cut into the disk in that location (Benchimol
et al., 2004). Another
component of the ventral disk is the microribbons. These structures extend anteriorly
from each microtubule towards the cell interior. The microribbons are composed mostly
of proteins called giardins (Peattie
et al., 1989). β-giardin is a structural protein which
spontaneously forms 2.5 nm fibers (Crossley and Holberton, 1985), predicted to form an
extended coiled-coil structure (Holberton
et al., 1988). Adjacent microribbons are
connected to each other by linear structures termed crossbridges (Peattie
et al., 1989;
Holberton, 1973). The crossbridges aid in holding together the whole disk structure
(Holberton, 1981). As the disk continues towards the periphery of the cell, it tapers off
into the lateral crest, a denser network of fibers. Actin has been localized to this
periphery of the disk, possibly aiding in contraction (Feely
et al., 1982). Further beyond
the end of the disk, the cell body extends into a flap called the ventrolateral flange. This
flap can protrude from just above the disk down towards the attachment substrate below
(Elmendorf
et al., 2003).
Mechanism of Attachment
In order to survive the turbulent conditions in the small intestine,
Giardia cells
must attach to the intestinal wall using an unresolved mechanism. Peristaltic movements
within the small intestine create fluid flows which will expel any contents not secured to
the intestinal wall. In order for
Giardia cells to remain in their nutrient-rich habitat and
multiply, they must have a strategy to remain in place. At least four different theories
compete to explain
Giardia's attachment in different ways.
Common themes run through many of the four theories. The first relies on lectin
binding, a usual method of cell-cell adhesion. The other three focus on the involvement
of the cytoskeleton. The first proposes that
Giardia "clutch" the substrate with the lateral
crest of the adhesive disk in a grasping motion. The remaining two rely on the concept of
a suction force between the
Giardia cell and its substrate. One proposes that fluid flow
caused by the beating of flagella dynamically creates a region of lower, or "negative"
pressure under the cell. The other proposes that this negative pressure is formed by a
"suction cup"-type contraction of the ventral disk. Recent focus has been on the latter
three models which propose a mechanical, not biochemical, basis of attachment.
Opinion currently disfavors the theory that surface lectin binding is the major
mediator in attachment. Some studies have suggested this theory in the past, showing
that inhibiting lectins with free sugars reduced
Giardia attachment to intestinal cells (Inge
et al., 1988). But further studies have disputed this purported effect (Magne
et al., 1991)
and the theory has trouble explaining the ease of attachment to hydrophobic substrates,
glass, and plastic (Hansen
et al., 2006) as well as the extreme preference for attaching
with the ventral surface. The true role of lectins seems to be to augment that of
mechanical mechanisms (Sousa
et al., 2001)
An alternative theory is that the lateral crest engages in a "clutching" action,
holding parasite to enterocyte. Epithelial cells are often damaged after attachment, left
with an indentation in the shape of the lateral crest (Erlandsen and Chase, 1974). This
suggests a mechanism where the lateral crest somehow intercalates itself into the
microvillous brush border of enterocytes. This could also be achieved by contracting the
ventral disk. The presence of contractile proteins in the periphery of the ventral disk
supports this theory (Feely
et al., 1982). Another study, by Erlandsen
et al. (2004)
suggests that the ventrolateral flange possesses some adhesive activity which helps to
initiate the clutching attachment by the lateral crest. However, to be clear, the initial help
which they propose the ventrolateral flange gives the cell in correctly orienting itself
could also act in conjunction with any of the other attachment hypotheses.
Another mechanical model, of flagella creating negative pressure through fluid
flow, is problematic. The idea, proposed by Holberton in 1974, was prompted by the
observation that the flagella constantly oscillate while the cell is attached. The idea is
that
Giardia's beating flagella directing a flow of fluid under the parasite, in-between the
ventrolateral flange and the lateral crest. Through a connection to the chamber under the
ventral disk, this fluid flow would create a zone of lowered pressure under the parasite.
This negative-pressure zone directly between the parasite and intestinal cell would draw
the two together. One issue with this is that the ventral flagella emerge in a different
place than was thought at the time of Holberton (Erlandsen and Feely, 1984), changing
the calculated fluid dynamics. Because of this issue and recent findings, favor has shifted
to another negative-pressure hypothesis.
This hypothesis, the "suction cup" theory, is based on the idea of the ventral disk
contracting upon contact, thus pulling up on the chamber between the cells and
generating a negative pressure. It is possible that the ventral disk itself is capable of
contracting, decreasing its diameter and thus becoming more concave (Sousa
et al.,
2001). Evidence for contractile proteins in the periphery of the disk supports this
hypothesis (Feely
et al., 1982). This increasing concavity of the disk would literally act
as a suction cup: increasing the volume sealed between the disk and enterocyte would
lower the fluid pressure. This decreased (or "negative") pressure would create a force
holding together the surrounding two cells. It can also be imagined how a strong enough
suction force could leave behind the marks seen on enterocytes in Erlandsen and Chase
(1974). Also, unpublished data collected by our lab unambiguously shows cells attached
to a glass surface and moving across the surface at the same time. A negative pressure
model is the only one which could conceivably fit such results. Still, the study by
Erlandsen
et al. (2004) shows cells attaching in situations where the possibility of
forming negative pressure has been eliminated. In this study, the authors created a
polystyrene attachment substrate composed of raised pillars less wide than the ventral
disk. The gaps between these pillars created an inevitable leak in the negative pressure
cavity. Some cells still attached to the pillars, showing that the generation of negative
pressure is not the only non-lectin mechanism of attachment. But the creation of pillars
reduced attachment rates more than sixfold, indicating the overall dominance of the
negative pressure mechanism.
Targeting Actin
A number of studies have shown the centrality of the cytoskeleton in attachment,
and the more tentative predominance of actin over tubulin. Many studies have treated
parasites with microtubule or microfilament-disrupting drugs, and seen inhibition of
attachment. The results have been very inconsistent, which may be the result of a
number of different drug concentrations, attachment substrates, and treatment protocols.
But generally microfilament-disrupting drugs have shown greater inhibition of
attachment at lower concentrations than microtubule-affecting drugs (Elmendorf
et al.,
The importance of microfilaments in attachment combined with its highly
divergent sequence highlights it as a potential drug target. In order to serve as an
effective target, however,
Giardia actin must differ structurally from mammalian
(human) actin. Drugs which bind to and inhibit
Giardia actin will detach the parasite but
will be ineffective if the same drug kills the adjacent host cell next to it by binding its
actin. Sufficient divergence would be normally unexpected in actin. It is usually very
strictly conserved, averaging 80-85% sequence identity in fungi, plants, and metazoa
(Doolittle and York, 2002). But fortunately
Giardia actin diverges greatly, on average
only 58% identical to other species' actin (Drouin
et al., 1995). Tubulin, however, is
more conserved than actin (Adam 2001). A quick NCBI BLAST search shows
Giardia
β-tubulin to be about 88% identical to the human version (accession numbers
XP_001707372 and NP_821080, respectively).
The highly divergent nature of
Giardia actin is made very clear by the failure of
standard microfilament drugs to take effect. Phalloidin-conjugated probes have been
unable to stain
Giardia microfilaments (Elmendorf, unpublished data). Jasplakinolide,
which binds to the same surface as phalloidin, is similarly unable to inhibit attachment at
any concentration. If attachment is actin-mediated, then this gives further evidence that
Giardia actin is jasplakinolide-insensitive. It still produces morphological disruptions,
though, at high concentrations (Carvalho and Monteiro-Leal, 2004). Cytochalasin B is a
known microfilament inhibitor, and it has shown its potential to affect
Giardia. It has
been shown to disrupt cytoskeletal structure by Correa and Benchimol (2006). It has also
been shown to disrupt attachment, but not unambiguously (Roskens and Erlandsen, 2002;
Sousa
et al., 2001).
Isolation of Giardia Actin
In order to assay
Giardia actin for its binding properties, it must be isolated and
purified. The gene has been cloned, and so can be expressed simply with a standard
prokaryotic expression system (Yin
et al., 2007). However, the eukaryotic actin gene
will likely not fold properly in a prokaryote. Actin folding is known to require
chaperones like CCT and prefoldin in yeast, otherwise emerging with a non-native
tertiary structure (Vainberg
et al., 1998; Speiss
et al., 2004). This could cause it to have
different binding and polymerization properties than
Giardia actin in vivo as well as
different filament morphologies. Thus a eukaryotic expression system is desirable.
A possible eukaryotic method of expression is the baculovirus system, though this
has not yielded great progress so far in our lab. Previous work in an Apicomplexan
protist,
Toxoplasma gondii, showed success in using a baculovirus expression system to
obtain actin. This system uses a baculovirus to transfect the desired actin gene into insect
cells, a eukaryotic cell line. The insect cells then express this actin gene, which has been
tagged with a 6xHis moiety consisting of six consecutive histidine residues. This
arrangement of residues chelates nickel atoms with high affinity, allowing the use of
nickel-agarose affinity chromatography to purify the extracted actin (Sahoo
et al., 2006).
This avenue is currently being pursued in our lab, but it so far had difficulty producing
actin in quantity. In any case, it still is an exogenous expression system with the
possibility of yielding a protein with non-native conformation. Thus a strategy to
produce the highest-fidelity actin is to extract actin directly from
Giardia itself.
Similar work has again been done in
T. gondii to extract its actin. Preceding
studies had used high-resolution Field Emission Scanning Electron Microscopy (FESEM)
to visualize actin filaments associated with the cytoskeletal subpellicular network of
T.
gondii (Schatten
et al., 2003). Patrón
et al. then isolated this structure using a detergent
extraction to obtain the actin associated with it. They purified the actin from the
subpellicular network with DNase I affinity chromatography (Patrón
et al., 2005). There
is similar FESEM work which has been done in
Giardia.
Benchimol
et al. have produced cytoskeletal preparations which seem to have
preserved some microfilament material. In some FESEM images there is a visible
amount of membrane-associated fibrillar material in the caudal complex underneath the
area where the funis branches out to contact the posterior-lateral axonemes. This fibrillar
material may contain membrane-associated actin. Other areas which seem to contain this
fibrillar material have been identified as structures where actin localizes. Such areas are
the basal bodies and the dense rods associated with the posterior-lateral axonemes (Feely
et al., 1982; Narcisi
et al., 1994; Benchimol
et al., 2004; Sant'Anna
et al., 2005). Still,
the appearance of the material is ambiguous. But the elucidation of its nature is aided by
a number of reasons why these areas should contain microfilaments (Benchimol, 2005).
First, actin typically nucleates at the plasma membrane and forms part of the cortical
cytoskeleton underlying the plasma membrane (Welch and Mullins, 2002). Also,
microtubules are clearly not present in any of the preparations, and the shape of the dorsal
membrane suggests that it requires cytoskeletal support. Thus, microfilaments are likely
to fill that role instead (Elmendorf
et al., 2003). Also, the movement of the caudal
complex during motility suggests a role there for contractile structures like
microfilaments (Benchimol
et al., 2004).
The same studies by Benchimol
et al. show the promise of a detergent treatment
to specifically dissociate actin. In the same studies showing cytoskeleton preparations
preserving the actin-like material, very similar preparations are shown where the actin
material has dissociated. The preparation seems to have used a very similar procedure,
implying that a small change in conditions may cause actin to be released from the cells
with minimal contamination (Benchimol, 2005). The material could then be isolated
from the detergent-treated cells, yielding a partially purified actin sample.
However, elucidating the best treatment to dissociate actin is difficult using only
the published work by Benchimol
et al. It is not clear what precise treatment yields the
preparations shown with actin and the preparations shown without actin. The most
important step, the method of proceeding from the former preparation to the latter, is
especially unclear. The technique could call for changing buffers, a physical step such as
agitation, or simply letting the sample incubate longer. Thus if I am to use this
information, I will have to complete the protocol myself through experimentation.
My specific procedure will be based on the above studies, adjusted for my
microfilament-specific goals. I will attempt to use a similar detergent extraction
procedure to Benchimol
et al. to remove most of the cell body with one step of detergent
extraction, then further treat with detergent to obtain a fraction enriched with actin. The
buffers will be based on the PHEM buffer (PIPES, HEPES, EGTA, MgCl2) used by
Benchimol
et al.. This is a common cytoskeletal preparation buffer which is used to
stabilize microtubules but also appears to do the same for microfilaments (Bell
et al.,
1989). In the buffer to be used to extract the cell bulk while preserving microfilaments, I
have added ATP, which is necessary to maintain actin polymerization (Welch and
Mullins, 2002). I have included ATP because strategy will begin with the goal of
preserving actin through the first phase of extraction. Then to cause actin to maximally
dissociate, I may have to add a different buffer without ATP and possibly Mg2+, which
also helps maintain polymerization. Thus I will refine my procedure over time based on
In order to obtain more information about the course of the extraction, I will use
fluorescent labels to monitor the cellular content of critical components. First, I will
monitor the loss of microfilaments using fluorescently-labeled Cytochalasin D
(Cytochalasin D-BODIPY FL). Preliminary data has shown the cytochalasin-based stain
successfully binding to
Giardia. At low concentrations, Cyto D-BODIPY has been
shown to leave cell morphology intact while labeling microfilaments (Munter
et al.,
2006). I will also attempt to monitor the the loss of cell membranes with membrane
fluorescent membrane stains like CM-DiI and BODIPY FL C5-ceramide. This will allow
me to judge when my treatments are successful in manipulating the presence of actin and
the rest of the cell.
Once I have sufficiently refined my treatment protocol, I will scale up the
procedure and produce and purify quantities of actin. I will have to adapt the protocol to
test tube-scale quantities in order to produce useful amounts of actin. This scaled-up
extraction protocol will produce eluate enriched with actin, but still containing cell
debris. Thus I will further treat this eluate to purify the actin for use. This may involve
affinity chromatography using DNase I, as in the work of Patrón
et al. (2005). Once
actin has successfully been obtained, I will purify it, possibly through affinity
The uses for a source of purified high-fidelity
Giardia actin are numerous and
diverse. The expression of a Toxoplasma gondii actin through baculovirus allowed
characterization of its unusual kinetics and filament morphology (Sahoo
et al., 2006).
Also, a recent preparation of
Plasmodium falciparum actin has yielded surprising data
about its polymerization dynamics (Schüler
et al., 2005). As an even more divergent
eukaryote, it is impossible to predict how
Giardia actin could behave. Electron
microscopy studies could examine the inherent morphology of
Giardial microfilament
networks as they form spontaneously in vitro from pure actin (Sahoo
et al., 2006).
Knowing the natural structure and dynamics of
Giardia's microfilament networks will
help us elucidate how the cytoskeleton controls attachment. Also, no actin-binding
proteins are currently known in
Giardia (Elmendorf
et al., 2003). This actin could be
utilized to perform co-precipitation experiments to isolate proteins bound to
microfilaments. This would allow us to better understand the actin dynamics and
evolutionary history of this basal eukaryote. Drug binding studies could also be
performed using a number of different methods, including surface plasmon resonance
spectroscopy. Using this method,
Giardial or human actin can be bound to a microscope
slide and exposed to a pharmacophore, and affinity can be directly quantified (Dierynck
et al., 2007). As emphasized above, this highly divergent protein presents a great
opportunity to find safe drugs acting on this new target.
Materials and Methods
Culturing Giardia lamblia
Genome strain
Giardia identical to the isolate used for the
Giardia Genome
Project at the Marine Biological Laboratory (Woods Hole, MA) was used for these
experiments. Cultures were maintained at 37°C in 9ml borosilicate tubes with TYI-S-33
medium (Keister, 1983) modified by replacing the phosphate buffer with 24mM sodium
bicarbonate. Subculturing was carried out by putting a confluent 9ml tube (about 2x106
cells/ml) in an ice bucket for 15 minutes to detach the
Giardia cells from the sides of the
tube by cold. A varying amount of cold
Giardia culture was inoculated into enough TYI-
S-33 medium to fill the 9ml tube, leaving 0.5ml air. The amount of cold
Giardia culture
added varied from 0.25µl to 4ml. The volume was selected according to which would
leave the tube 50% confluent, in mid-log growth phase, by the time of experiment,
assuming a 6 hour doubling time. Tubes to perpetuate the culture more often were
inoculated with 1-200µl.
Preparation of Giardia for fluorescent staining and microscopic examination
In preparation for treatment with fluorescent stain and examination under light
microscopy, a 10-well heavy Teflon-coated microscope slide was treated with 10µl 0.1%
poly-L-lysine on each 5mm diameter well. After 15 minutes, the poly-L-lysine was
washed off twice and replaced with Dulbecco's phosphate buffered solution (PBS).
Then a 50% confluent
Giardia culture tube was rinsed with 37°C PBS by
replacing its volume twice. The tube was then incubated on ice for 15 minutes to detach
Fluorescent labeling of Giardia microfilaments with Cytochalasin D-BODIPY FL
After incubating on ice for 15 minutes, about 1x106 cells/ml of PBS-suspended
Giardia were treated with a final concentration between 10 and 50nM Cytochalasin D-
BODIPY FL (Invitrogen, Inc.), except for a control aliquot. 50µl of the suspension was
then placed in each well of the slide. The slide was then incubated at 37°C in 5% CO2 in
a moistened container for between 45 and 60 minutes. In other trials, the Cyto D-
BODIPY-treated suspension was incubated on ice for 25 minutes, then for 55 minutes at
Fluorescent labeling of Giardia membranes with CM-DiI
In other trials,
Giardia cells were labeled instead with CM-DiI (Invitrogen, Inc.).
After the 15 minute incubation on ice, about 1x106 cells/ml of PBS-suspended
Giardia
were treated with a final concentration between 0.1 and 10µM DiI, except for a control
aliquot. 50µl of the suspension was then placed in each well of the slide. In some trials,
the DiI was added directly to the 50µl aliquots in each well. Then in some of those trials
the slide and its aliquots were pre-warmed to 37°C. The slide was then incubated at 37°C
in 5% CO2 in a moistened container for between 2.5 and 15 minutes.
Fluorescent labeling of Giardia membranes with BODIPY FL C5-ceramide
In other trials,
Giardia cells were labeled instead with BODIPY FL C5-ceramide
(Invitrogen, Inc.). After the 15 minute incubation on ice, about 1x106 cells/ml of PBS-
suspended
Giardia were treated with a final concentration between of 200nM BODIPY-
ceramide, except for a control aliquot. 50µl of the suspension was then placed in each
well of the slide. Then the slide was incubated at 37°C in 5% CO2 in a moistened
container for 30 minutes.
Light microscope observation of detergent treatment of Giardia lamblia
Stained
Giardia cells were treated with PHEM-NA buffer before observation
under DIC and fluorescent microscopy. After the incubation with Cyto D-BODIPY, the
fluid on the slide was replaced twice with PHEM-NA (60mM PIPES, 25mM HEPES,
10mM EGTA, 2mM MgCl2, 1mM ATP and a range of NP-40 between 2% and 40%) or
PBS as a control. Then the slide was examined under a Zeiss Axioplan 2 microscope for
periods between 20 to 90 minutes. Differential interference contrast imaging would be
used, as well as fluorescence imaging. For Cyto D-BODIPY, and BODIPY-ceramide,
the excitation wavelength used was 480nm and the emission wavelength used was
535nm. For DiI, the excitation wavelength used was 545nm and the emission
wavelength used was 610nm.
Microscopic observations of detergent treatment of Giardia with PHEM-NA
In order to begin refining the correct buffers and steps in detergent extracting
actin from
Giardia, I first devised a preliminary buffer: PHEM-NA. This is composed of
PHEM, a common cytoskeleton-preserving buffer, ATP, required for continued actin
polymerization, and NP-40, used in the cytoskeletal preparations of Benchimol
et al.
PHEM is composed of 60mM PIPES, 25mM HEPES, 10mM EGTA, and 2mM MgCl2. I
then treated
Giardia cells with PHEM-NA on a microscope slide in order to observe the
progress of the treatment through differential interference microscopy (DIC). After
treating a slide with poly-L-lysine to aid cellular attachment, I would allow cells to attach
and then wash them twice with this buffer. When I first observed the results under the
microscope, however, I only observed immobile cells detached from the slide for both the
PBS-treated control and the PHEM-NA-treated cells. I was concerned that the amount of
poly-L-lysine I used was excessive, therefore I then tested different applications of poly-
L-lysine. One experiment showed that
Giardia cells become immobile and detached
from the slide when it is treated by allowing 50µl of 0.1% poly-L-lysine solution to dry
on each 5mm diameter well before application of a suspension of
Giardia cells.
However, if each well on the slide is treated with 10µl of poly-L-lysine for 15 minutes
before washing it off twice with PBS,
Giarda cells will adhere to the slide when
incubated at 37°C and their flagella will remain oscillating (data not shown). Presumably
the lower volume of poly-L-lysine and the step of washing it off greatly reduced the
concentration of poly-L-lysine in the solution containing
Giardia cells. Resolving the
correct application of poly-L-lysine allowed me to perform detergent treatments on cells
not being adversely affected by another variable.
I then proceeded to apply treatments of PHEM-NA with 2% - 40% NP-40, which
subtly affected the appearance of the cells under DIC light microscopy. At first I used a
range of detergent concentration in order to learn which is most effective at extracting the
cells. Very quickly (within about 3 minutes) after treatment with any of the above NP-40
concentrations,
Giardia cells appear flat under DIC microscopy, with much less contrast
defining their features than in the PBS control (Fig. 1). After treatment with PHEM-NA
with 10% NP-40, a small fraction of cells appear to lose the visible membrane
encompassing the caudal complex. At this stage the outline of the cell seems to consist
of the edges of the ventral disk and the caudal axonemes (Fig. 2). Not many cells appear
in this state, though more appear as the detergent treatment progresses. By about 30
minutes of treatment, there are at most 1 cell out of every 12 in this state. Using DIC
light microscopy, the observed shape and features of the cells are mostly retained during
detergent treatment, with the exception of some cells whose shape is subtly altered.
Fluorescent labeling of Giardia microfilaments with Cytochalasin D-BODIPY FL
Based on the DIC observations of only a change in contrast and shape, I was
unable to make any definitive conclusions about the effects of PHEM-NA on the cell
membranes or microfilaments. Thus I decided to stain those components of the cell
before detergent treating in order to precisely visualize the effects on them. I first used
Cytochalasin D-BODIPY FL, which consists of the BODIPY fluorophore bonded to
Cytochalasin D, a fungal drug which normally binds to microfilaments and induces
depolymerization. However, at low concentrations it can simply bind microfilaments,
without disrupting them (Munter
et al,. 2006). Thus at these concentrations it binds to
microfilaments and fluorescently labels them.
Initial trials using Cyto D-BODIPY successfully produced moderate fluorescence,
but I could not obtain successful results beyond that point. When incubating in 50nM
Cyto D-BODIPY for 55 min, the cells are capable of exhibiting a faint fluorescence that
seems distributed throughout the cell (Fig. 3A). After some initially successful
treatments, however, the results showed no fluorescence at all (Fig. 3B). After many
experiments attempting to isolate the cause of the unsuccessful staining, I decided to put
the troubleshooting on hold indefinitely.
Fluorescent labeling of Giardia outer membranes with CM-DiI
In order to clarify the effects I observed earlier of PHEM-NA on the cell
membranes, I began adapting for
Giardia a protocol for fluorescently labeling the outer
membranes of the cells with CM-DiI. DiI consists of a fluorophore and two hydrophobic
hydrocarbon tails. The hydrophobic tails cause the molecule to incorporate into the
plasma membrane of cells, thus labeling it with the attached fluorophore. In order to
determine the most effective working concentration, I first performed an assay with serial
dilutions of DiI staining cells at 37°C for 20 minutes. The results indicated that staining
with 0.1µM DiI produces negligible staining of
Giardia cells. 1µM DiI stains cells very
rarely, and 10µM DiI stains at the most 1 in 6 cells. As a reference, the manufacturer
protocol suggests a maximum working concentration of 5µM (Molecular Probes, Inc.
2005). When stained, the efficiency of the staining is extremely variable. Cells exposed
to 10µM DiI sometimes fluoresce barely enough to be visible, while some cells exposed
to 1µM DiI fluoresce brightly.
Along with the inefficiency of DiI staining, when applied in the above manner it
forms what seem to be aggregates in the medium. When applied in concentrations
anywhere between 0.1µ M and 10µ M, DiI produces specks of very bright fluorescence
separate from the cells. The effect can be observed after incubating 3.3 – 5µM DiI for
anywhere between 2.5 and 20 minutes at 37°C. Pre-warming of the slide and cells does
not block the effect. The size of the specks can range from smaller than a nucleus to a
few cell-widths across. Some specks seem to associate with the outer membranes of
stained cells, but most seem to be free-floating (Fig. 4). Because of the persistence of the
inefficient staining, aggregation, and possible adverse effects on membrane integrity, I
decided to investigate an alternative membrane dye.
Fluorescent labeling of Giardia membranes with BODIPY FL C5-ceramide
In view of the difficulties inherent in membrane-staining with DiI, I moved to
BODIPY-ceramide, a membrane dye based off of sphingosine. Sphingosine is a common
membrane lipid, causing this molecule to also incorporate itself into membranes. This
stain has been shown to label more evenly all the intracellular membranes in addition to
the plasma membrane (Hernandez
et al., 2007). I incubated the cells in 200nM
BODIPY-ceramide for 30 minutes at 37°C, as described in Hernandez
et al. (2007). This
treatment produces a very efficient labeling, staining almost every cell (Fig. 5).
Unfortunately, preliminary data suggested difficulties of BODIPY-ceramide to label cells
after washing with PHEM-NA. After following the same procedure as above, I then
washed the cells with PHEM-NA and control cells with PBS. No fluorescence was then
observed in either PBS or PHEM-NA treatments (data not shown). However, I have
performed too few detergent treatment trials with this stain to judge its usefulness in my
study. The efficiency of its staining suggests optimism for its future use.
Discussion
This project made some initial progress in refining a protocol to detergent extract
Giardia cells to elute a sample enriched with actin. To begin, I observed some
exploratory detergent treatments of cells on a microscope slide to gauge its effectiveness
before scaling up. These observations showed progress, indicating that the extraction
was achieving similar results to those in the papers by Benchimol
et al. which it was
based on. Using only DIC light microscopy it was impossible to verify that the observed
events were the same as those depicted in the EM images by Benchimol
et al. Thus I
began working to refine the use of fluorescent labels to identify the presence of key parts
of the cells. After encountering obstacles in the use of some labels, this work remains
unfinished. But the initial results from the DIC observations suggest that my treatment
may be appropriate only for the first phase of extraction, after which I may need to alter
the procedure in order to elute actin in the proper way. Once eluted, the actin can then be
purified in some method, for example with DNase I affinity chromatography (Patrón
et
al., 2005). This actin can then be used in a number of studies which require
Giardia actin
in its native conformation.
Initially there was a problem with cells dying on the slide before the treatment,
which turned out to be due to excessive concentrations of poly-L-lysine on the slide. My
first procedure called for letting 50µl of 0.1% poly-L-lysine dry in each well, then adding
PBS-suspended cells to the wells. This would re-solvate most of the poly-L-lysine again,
resulting in a concentration which was apparently lethal to the cells. I discovered this in
an experiment using decreasing amounts of poly-L-lysine. Smaller amounts of poly-L-
lysine treatment resulted in more attached, animated cells. But more crucial was the step
of washing off the poly-L-lysine with PBS before adding cell solution. Presumably this
reduced the poly-L-lysine concentration greatly, indicating that the lethal effect was
probably from a hypertonic solution. Through this experimentation I resolved this issue
and thus could observe detergent treatments on cells unhindered by other effects.
These experiments in detergent extracting
Giardia cells with PHEM-NA initially
showed little effect until I noticed a specific phenomenon which suggested partial lysis
by the detergent. At first there seemed to be little extraction occurring, even with 40%
detergent, since the cells seemed to mostly retain their intact morphology. But once I
took into account the drastic change in contrast between treated and untreated cells, it
became apparent that much was likely occurring. The phenomenon of cell ghosts has
long been documented (Matter, 1979). A ghost is essentially the "shell" of a lysed cell
which has lost its cytoplasm but retained most of its membrane and shape. This
occurring in
Giardia would be unsurprising, as its extensive cytoskeleton would cause its
external morphology shape to persist. The cytoplasm normally creates contrast under
DIC microscopy, as it has a different index of refraction than the surrounding medium.
Ghosts, which lack cytoplasm and hence this boundary between different indices of
refraction, will display borders not as well-defined. This is precisely what occurred in the
detergent-treated cells. They lost the high contrast of their outer border exhibited by the
PBS-treated cells. Their overall shape was usually preserved, with the teardrop outline of
the cell intact (Fig. 1). This makes it unclear how extensive the membrane damage to the
cells was. Loss of a relatively small patch of membrane could conceivably result in the
extrusion of the cytoplasm. The other extreme possibility is that all of the dorsal
membrane was removed, leaving only the part of the ventral surface attached to the slide.
The tendency for this to occur is suggested by Benchimol (2005), where detailed SEM
images show cells having lost all membranes except the ventral surface. These results
were also obtained after a detergent extraction on live cells attached to a poly-L-lysine
surface. Hence the loss of contrast in my cells made it appear that they were exhibiting
the extensive loss of membrane and cell body shown in the paper by the Benchimol
Another result in this article, fully-demembranated cells, seems to occur in my
data, though the evidence is insufficiently conclusive. Though most cells retain their pre-
treatment outline, after several minutes of detergent extraction I began to see cells which
seemed to have lost all membranes (Fig. 2). The teardrop shape had been lost, seeming
to leave only the ventral disk and caudal axonemes. In Benchimol (2005), there is an
SEM image of a cell which has lost the ventral membrane and retains only the ventral
disk, caudal axonemes, and nuclei after detergent treatment. This would create the same
silhouette as I observed under DIC microscopy. As above, though, there are other
possibilities as to what is actually occurring. From the observed data, it is also possible
that the membrane immediately posterior to the ventral disk is simply being pulled in,
flush with the disk and axonemes. Also, even if the appearance is due to membrane loss,
it cannot be said whether the rest of the ventral membrane, which is hidden by the disk
and axonemes, has also dissociated. The visual similarity of these results to those
obtained in Benchimol (2005) makes it seem likely that they are the same phenomena.
However, the paucity of information supplied by DIC light microscopy makes it
necessary to confirm the actual course of events with more revealing methods.
The use of membrane and microfilament fluorescent labeling was intended to
provide specific information about the cellular content of components. Cells were to be
stained with Cytochalasin D-BODIPY FL prior to detergent treatment, which would bind
to their microfilaments to label them during the extraction. This would reveal how
quickly and at what point microfilaments dissociate from the cell. Similarly, staining
with CM-DiI or BODIPY-ceramide FL C5 would label membrane content during
treatment and reveal the same information. Membrane labeling would reveal whether the
cell membrane was actually present but pulled inward when the cells appeared to only
retain the ventral disk and axonemes. BODIPY-ceramide, which stains more evenly the
intracellular membranes as well as the plasma membrane, could provide additional
information about the loss of a variety of other organelles. Thus these stains would
hopefully resolve the question of whether my results were duplicating those in Benchimol
Unfortunately, both Cyto D-BODIPY and DiI failed to stain cells efficiently, even
through many alterations in protocol. Though Cyto D-BODIPY initially showed some
successful results, it persistently failed to stain after those trials. The specks observed
when staining with DiI suggest the amphipathic dye has a tendency to precipitate out of
solution and aggregate with itself. After attempting a number of procedure variations,
this tendency seems to be not easily overcome. This aggregation of the dye may or may
not be responsible for the uneven and inefficient staining of the cells. The seemingly
random staining of some cells and not others suggests some sort of stochastic process.
This could be because the stain is sequestered in droplets, lowering the stain
concentration in the medium to ineffective levels. It may be that a droplet will stain a cell
when the proper contact is made, but this occurs infrequently, resulting in a few cells
being relatively well stained (Fig. 4). However the mechanism, neither DiI nor Cyto D-
BODIPY would efficiently stain using reasonable iterations on my procedure.
In light of these difficulties, I moved to BODIPY-ceramide, which efficiently
stained the periphery and cytoplasm of almost all treated cells. Unfortunately, though,
initial experiments using BODIPY-ceramide during detergent treatment were
unsuccessful. This may be because the PBS and PHEM-NA buffers replaced the medium
containing the stain, if it is necessary for the cells to remain exposed to stain in order to
fluoresce. Thus including BODIPY-ceramide in the PHEM-NA and PBS buffers may
alleviate this problem. The use of BODIPY-ceramide may also be more useful than DiI
beyond efficiency. BODIPY-ceramide stains more intracellular membranes than DiI,
thus labeling intracellular organelles which represent a portion of the cytoplasmic
content. This helps to reveal more information about when the extraction has eliminated
cell debris, which hopefully will be before most of the microfilaments are disrupted.
Hence BODIPY-ceramide shows much promise as a stain, though an unknown amount of
work lies ahead before it can be made use of in a deteregent extraction.
My most informative data remains the DIC imagery of ghosted cells, which
unfortunately suggests that the timespan of actin dissociation may not be short enough to
be useful. As described above, two crucial states observed during extractions seemed to
represent ghosted cells and bare cytoskeletons with membranes wholly removed. These
states likely represent two images in Benchimol (2005) where actin is present and then
absent, respectively. If, during the course of detergent extraction, most cells became
ghosts and then moved to the bare cytoskeleton stage in synchrony, a very useful actin
fraction could be eluted. During the relatively short transition from the former stage to
the latter, a high proportion of the material being eluted would be dissociating actin. This
eluate would contain much more actin proportionally than a whole cell lysate would.
Then this fraction could be further purified, perhaps using chromatography, and utilized
in a number of studies requiring high-fidelity
Giardia actin. But the span of time over
which the cells seem to make this transition is almost the entire course of the extraction.
Barring other solutions, this lack of rapid actin dissociation would drastically reduce the
usefulness this detergent extraction.
There are a number of actin-enriching alterations to the protocol which I could
attempt. First, it is possible that better synchronization of actin dissociation could be
obtained through a physical step such as agitation of the cells. If agitation fails, then I
could treat with a different buffer which would cause a synchronized transition. After
ghosting the cells with PHEM-NA, which includes ATP and Mg2+ to preserve actin, I
could then treat with another buffer which would induce rapid dissociation of actin from
the cytoskeleton. There was always a question whether obtaining the transition suggested
in Benchimol (2005) would require simply longer treatment time, agitating the cells, or
entirely switching detergent buffers. If these alterations are unsuccessful, I could take an
alternative strategy which does not attempt to dissociate actin from the cytoskeleton at
all. This would involve using dimethyl sulfide to crosslink microfilaments to the
cytoskeleton and saving this as a cytoskeleton-enriched fraction. This would be similar
to the approach of Patrón
et al. (2005) in obtaining a
T. gondii subpellicular network
fraction enriched with actin before further purifying the actin through chromatography.
The future progress to be made in this project involves the above steps in refining
the extraction, then scaling up the extraction and purifying the actin product. First I have
to resolve, on the microscope slide, whether the cells require a physical or chemical
prompt to rapidly relinquish their actin. Then I must make the proper adjustments to
translate this knowledge into a production-scale procedure. Even a treatment using a few
milliliters of cell suspension could have very different behavior. In the course of
producing this procedure I would use some diagnostic to visualize or quantify the amount
and purity of actin I elute. A simple SDS-PAGE gel could give an indication of this.
Then I must further purify the actin obtained, likely using a similar affinity
chromatography setup to that in Patrón
et al. (2005). They utilized the affinity of actin
for the enzyme DNase I to immobilize actin on a DNase I column. It is largely unknown
whether the unique actin of
Giardia will efficiently bind DNase I, though very
preliminary data from our lab suggests that it can. There are many steps before I have a
full procedure to obtain pure, native
Giardia actin, but that actin would enable many
extremely informative studies.
High-fidelity
Giardia actin would greatly enable studies on the cytoskeletal
system of
Giardia and experiments on drug targets in the parasite. The basic dynamics of
giardial microfilaments, their networks, and regulation are currently completely
uncharacterized. The key obstacle to studying these issues is obtaining quality
Giardia
actin. After similarly purifying
T. gondii actin, Patrón
et al. (2005) were able to make
morphological characterizations about the microfilaments of that species using electron
microscopy. Another potential achievement would be the identification of an actin-
binding protein in
Giardia. Using
Giardia G-actin and F-actin as the "bait" in affinity
chromatography, it may be possible to extract actin binding proteins from
Giardia lysate.
The existence and exact nature of these proteins would reveal much about the unique
system of regulating microfilament dynamics in
Giardia. These proteins would
presumably be unique to
Giardia and also would mediate actin dynamics, a process
crucial in attachment. This suggests them as potential drug targets, alongside actin itself.
Using actin and any associated proteins, we may perform drug binding studies using
surface Plasmon resonance microscopy. This allows the quantification of drug affinity to
Giardia and human actin, along with other important drug kinetics. Importantly, a study
by Dierynck
et al. (2007) shows that only a few changes in a protein are required to
change the values of these kinetics by several orders of magnitude. Thus studying actin
expressed exogenously in
E coli., which is known to lack required folding mediators
(Vainberg
et al., 1998; Speiss
et al., 2004), risks invalidating the quantification. The
same concerns apply to all of the aforementioned potential quantifications and
characterizations. Thus the effort to obtain high quality
Giardia actin, through this or any
other means, is crucial to understanding the cytoskeleton of
Giardia lamblia and the
disease it causes.
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Figure 1. Detergent treatment with of
Giardia lamblia attached to a poly-L-lysine
slide. Image captured using DIC light microscopy at 40X magnification. (A) cells
treated with PHEM-NA containing 2% NP-40 for 17 minutes. (B) control cells treated
with PBS for 22 minutes.
Figure 2. Detergent treatment of
Giardia lamblia attached to a poly-L-lysine slide.
Image captured using DIC light microscopy at 63X magnification. Cells were treated
with PHEM-NA containing 10% NP-40 for 18 minutes. Inset: center cell enlarged a
further 2X, with digitally enhanced contrast.
Figure 3. Giardia lamblia attached to a poly-L-lysine treated slide, treated with 50nM
Cytochalasin D-BODIPY FL for 55 minutes at 37°C. Images captured using
fluorescent microscopy at an excitation wavelength of 480nm and an emission
wavelength of 535nm. (A) an early trial, captured at 20X magnification and digitally
enhanced in brightness and contrast. (B) a later trial, captured at 63X magnification.
Figure 4. Giardia lamblia cells attached to a poly-L-lysine treated slide, treated with
10µM CM-DiI for 15 minutes at 37°C. Image captured at 63X magnification using
fluorescent microscopy at an excitation wavelength of 545nm and an emission
wavelength of 610nm.
Figure 5. Giardia lamblia cells attached to a poly-L-lysine treated slide, treated with
200nM BODIPY FL C5-ceramide for 30 minutes at 37°C. Images obtained at 63X
magnification focused on the same field of view. Three cells are visible at the upper left,
middle, and bottom right corner of the images. (A) fluorescent microscopy at an excitation
wavelength of 480nm and an emission wavelength of 535nm. Contrast and brightness have
been digitally enhanced. (B) DIC light microscopy.
Source: http://www.nsto.co/media/thesis.pdf
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